Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IGHVII-1-1-201ENST00000517907 180 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 IGHV3-75-201ENST00000523951 358 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AL390254.1-201ENST00000554033 465 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC005829.1-202ENST00000562555 298 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AP001357.2-201ENST00000586758 710 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 LINC00649-212ENST00000601471 538 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 RBM7-209ENST00000624815 3587 ntTSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 SS18-205ENST00000542420 2321 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 METTL4-201ENST00000319888 3601 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC139495.3-201ENST00000515156 4437 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 EAPP-201ENST00000250454 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 GLI1-208ENST00000546141 3475 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC005165.1-201ENST00000446840 1870 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ABI2-211ENST00000422511 2718 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 ZNF429-201ENST00000358491 2233 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 AC040162.3-201ENST00000572067 3907 ntBASIC8.72□□□□□ -1.01
NPIPA3F8WFD2 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 RTTN-202ENST00000578780 2333 ntTSL 5 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 CLDN18-201ENST00000183605 3520 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 RFLNB-201ENST00000329099 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 AL162293.1-201ENST00000373508 2112 ntTSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 LIMD1-AS1-201ENST00000427644 1536 ntTSL 3 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NPIPA3F8WFD2 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 FMO6P-205ENST00000639957 1597 ntTSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 GPRC5D-201ENST00000228887 1038 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 GPRC5D-202ENST00000396333 903 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AL023773.1-201ENST00000423985 1124 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ADGRF5P1-201ENST00000435875 1135 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 HNRNPA1P47-201ENST00000453073 931 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC104451.1-201ENST00000458010 176 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL159P-201ENST00000485164 292 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 SEMA6A-AS1-201ENST00000507558 436 ntTSL 3 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC027369.4-201ENST00000534243 816 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC073651.2-201ENST00000544148 660 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC100826.1-201ENST00000558010 890 ntTSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 LINC00566-201ENST00000561557 570 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 SCGB2B3P-201ENST00000599388 409 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 PHBP20-201ENST00000603694 818 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL185P-201ENST00000615150 249 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL673P-201ENST00000616262 237 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL495P-201ENST00000616925 237 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL719P-201ENST00000620196 237 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 Metazoa_SRP.164-201ENST00000620748 331 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AL121955.1-201ENST00000620852 303 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 RN7SL469P-201ENST00000621501 237 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 LINC01943-201ENST00000625410 559 ntTSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms