Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC233724.5-201ENST00000509526 598 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 PPIAP11-201ENST00000510729 493 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC007036.3-201ENST00000511893 614 ntTSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 PPBPP2-202ENST00000514391 346 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 LINC01843-201ENST00000515627 1107 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 RNA5SP409-201ENST00000516815 109 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC005832.4-201ENST00000536588 818 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 NDUFB10P2-201ENST00000568872 478 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 MIR4269-201ENST00000578705 84 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 TRPC5OS-202ENST00000612026 1043 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 MIR6760-201ENST00000617342 68 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 HNRNPCL2-202ENST00000621994 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC020604.1-201ENST00000622979 1909 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC091962.1-201ENST00000561496 1765 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AL031118.1-201ENST00000607727 2955 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC008074.3-201ENST00000561559 1907 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 RAB11FIP1P1-201ENST00000438337 1762 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 PYHIN1-205ENST00000392254 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CCL27-201ENST00000259631 446 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AL136968.1-201ENST00000403053 946 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 LINC01643-201ENST00000412218 757 ntTSL 5 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC103563.3-201ENST00000428055 354 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 HMGN1P38-201ENST00000431116 303 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 VN2R9P-201ENST00000431428 953 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 TMEM256P2-201ENST00000440241 341 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CASP12-205ENST00000441710 1168 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CCDC162P-207ENST00000473454 547 ntTSL 4 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AP003031.2-201ENST00000533945 573 ntTSL 4 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC127070.4-201ENST00000536775 385 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 AL662844.2-201ENST00000538455 284 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC021818.1-201ENST00000561316 547 ntTSL 5 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ZNF761-205ENST00000613950 646 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LINC01002-203ENST00000631484 754 ntTSL 3 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LINC01002-230ENST00000633592 568 ntTSL 5 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AL137798.3-201ENST00000639399 166 ntBASIC8.74□□□□□ -1.01
SNX18Q96RF0 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 CYP19A1-204ENST00000405913 1697 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ZNF833P-202ENST00000635221 1540 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC8.74□□□□□ -1.01
SNX18Q96RF0 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNX18Q96RF0 KRTAP16-1-201ENST00000391352 1554 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 GUCY1B3-203ENST00000503520 1951 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 FAM180A-201ENST00000338588 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms