Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 OR14K1-201ENST00000283225 945 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
P04436 NECAP1P1-201ENST00000320802 830 ntBASIC8.72□□□□□ -1.01
P04436 AL355297.1-201ENST00000402808 388 ntBASIC8.72□□□□□ -1.01
P04436 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 UGT1A13P-201ENST00000424780 762 ntBASIC8.72□□□□□ -1.01
P04436 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC8.72□□□□□ -1.01
P04436 PDPN-204ENST00000475043 849 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC8.72□□□□□ -1.01
P04436 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
P04436 PGAM1P1-201ENST00000504014 556 ntBASIC8.72□□□□□ -1.01
P04436 NUP210P3-201ENST00000506964 388 ntBASIC8.72□□□□□ -1.01
P04436 SEMA6A-AS1-201ENST00000507558 436 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 AC093857.1-201ENST00000511603 760 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 NPIPA3-201ENST00000526520 954 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 NPIPA2-201ENST00000529166 1110 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC8.72□□□□□ -1.01
P04436 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC8.72□□□□□ -1.01
P04436 RNA5SP357-201ENST00000607318 119 ntBASIC8.72□□□□□ -1.01
P04436 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
P04436 CCDC14-201ENST00000310351 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC8.72□□□□□ -1.01
P04436 ACTA2-201ENST00000224784 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 ACSM4-201ENST00000399422 2142 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 UVSSA-201ENST00000324803 4441 ntBASIC8.72□□□□□ -1.01
P04436 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
P04436 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P04436 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC8.72□□□□□ -1.01
P04436 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC8.71□□□□□ -1.01
P04436 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
P04436 PPP3CB-AS1-203ENST00000442133 2888 ntTSL 3 BASIC8.71□□□□□ -1.01
P04436 SS18-205ENST00000542420 2321 ntTSL 2 BASIC8.71□□□□□ -1.01
P04436 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
P04436 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.01
P04436 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.71□□□□□ -1.01
P04436 AC004156.1-201ENST00000591866 3319 ntTSL 2 BASIC8.71□□□□□ -1.01
P04436 CTAGE14P-201ENST00000397819 2403 ntBASIC8.71□□□□□ -1.01
P04436 MRPS14-202ENST00000476371 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
P04436 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
P04436 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
P04436 BROX-208ENST00000539697 3734 ntTSL 2 BASIC8.71□□□□□ -1.01
P04436 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 MIR623-201ENST00000384986 98 ntBASIC8.71□□□□□ -1.02
P04436 MIR503-201ENST00000385270 71 ntBASIC8.71□□□□□ -1.02
P04436 RN7SKP3-201ENST00000411409 358 ntBASIC8.71□□□□□ -1.02
P04436 AC092035.1-201ENST00000418538 390 ntBASIC8.71□□□□□ -1.02
P04436 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC8.71□□□□□ -1.02
P04436 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC8.71□□□□□ -1.02
P04436 RPL12P29-201ENST00000425565 457 ntBASIC8.71□□□□□ -1.02
P04436 AL512353.1-203ENST00000444563 610 ntTSL 2 BASIC8.71□□□□□ -1.02
P04436 AC009945.1-201ENST00000453188 298 ntBASIC8.71□□□□□ -1.02
P04436 NPAP1P2-201ENST00000456716 1234 ntBASIC8.71□□□□□ -1.02
P04436 ILF2P1-201ENST00000486302 1168 ntBASIC8.71□□□□□ -1.02
P04436 LINC00900-202ENST00000501294 982 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
P04436 IGHVII-1-1-201ENST00000517907 180 ntBASIC8.71□□□□□ -1.02
P04436 STMN2-202ENST00000518111 799 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC8.71□□□□□ -1.02
P04436 AC044839.2-201ENST00000531982 534 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
P04436 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC8.71□□□□□ -1.02
P04436 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 RN7SL185P-201ENST00000615150 249 ntBASIC8.71□□□□□ -1.02
P04436 RN7SL673P-201ENST00000616262 237 ntBASIC8.71□□□□□ -1.02
P04436 RN7SL495P-201ENST00000616925 237 ntBASIC8.71□□□□□ -1.02
P04436 RN7SL719P-201ENST00000620196 237 ntBASIC8.71□□□□□ -1.02
P04436 RN7SL469P-201ENST00000621501 237 ntBASIC8.71□□□□□ -1.02
P04436 AL357143.2-201ENST00000640266 421 ntBASIC8.71□□□□□ -1.02
P04436 IPO5P1-201ENST00000593576 2887 ntBASIC8.71□□□□□ -1.02
P04436 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
P04436 THAP12P2-201ENST00000489193 2267 ntBASIC8.71□□□□□ -1.02
P04436 AK2-215ENST00000629371 3576 ntTSL 3 BASIC8.71□□□□□ -1.02
P04436 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC8.71□□□□□ -1.02
P04436 AC008507.5-201ENST00000624591 1969 ntBASIC8.71□□□□□ -1.02
P04436 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
P04436 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
P04436 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms