Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SMYD3-IT1-201ENST00000426929 361 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC244098.1-201ENST00000436499 275 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC104088.1-201ENST00000445613 510 ntTSL 5 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC245884.4-201ENST00000450173 472 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 HCG25-220ENST00000450514 759 ntTSL 3 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 BX842568.2-201ENST00000453595 1230 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RN7SL402P-201ENST00000465059 264 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 DLEU1-220ENST00000478860 602 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RPL29-206ENST00000481629 880 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC133435.1-201ENST00000498753 576 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC106794.2-201ENST00000513713 632 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 ST13P5-201ENST00000526214 1110 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC008915.1-201ENST00000561624 837 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RN7SL462P-201ENST00000610302 261 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 uc_338.27-201ENST00000611385 169 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RN7SL422P-201ENST00000612850 261 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC099518.6-201ENST00000617407 450 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 MIR8078-201ENST00000619811 84 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RN7SL343P-201ENST00000620904 261 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RN7SL640P-201ENST00000622591 261 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 FAM238A-202ENST00000637359 442 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC100788.2-201ENST00000625199 2889 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AL133325.3-201ENST00000622757 3674 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 ZNF232-208ENST00000575898 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 GULP1-201ENST00000359135 3347 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC245291.2-201ENST00000451224 1651 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 PGAM1P8-202ENST00000534819 2354 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MTFR1L-204ENST00000374307 1868 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AP002847.1-201ENST00000625136 2245 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 KNOP1P5-201ENST00000358374 1378 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 NBPF22P-202ENST00000590707 1580 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 OR10H4-201ENST00000322107 951 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC010731.1-201ENST00000426087 846 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 LINC00674-201ENST00000435469 678 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC108488.1-205ENST00000438482 914 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 PHKG1P1-201ENST00000442924 614 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 LINC01627-201ENST00000452923 243 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AL662791.2-201ENST00000455287 596 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MEF2C-AS1-203ENST00000508718 483 ntTSL 4 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC021860.1-201ENST00000515436 376 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 IGLVI-38-201ENST00000519982 385 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC127070.4-201ENST00000536775 385 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC007922.1-201ENST00000583122 459 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MTND6P22-201ENST00000604233 521 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 MIR6831-201ENST00000617240 81 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC010087.1-201ENST00000618630 438 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 SMG6-IT1-201ENST00000624930 374 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 CTBP1-219ENST00000629223 210 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 UHRF2P1-201ENST00000431339 2387 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 AC004801.7-201ENST00000624535 2973 ntBASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
NPIPA3F8WFD2 GIMAP4-201ENST00000255945 2060 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms