Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RN7SL539P-201ENST00000610974 291 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 RN7SL196P-201ENST00000614361 291 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 RN7SL286P-201ENST00000616519 291 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 CD9-201ENST00000009180 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 AC008124.1-201ENST00000609803 9730 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC8.8□□□□□ -1
SNX18Q96RF0 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 DCAF13-205ENST00000521971 2049 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 TMC3-AS1-207ENST00000642113 2043 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 Z99289.2-201ENST00000603682 1931 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 PRAMEF30P-201ENST00000438176 1417 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 KNOP1P2-201ENST00000605379 1317 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 C9orf84-202ENST00000374283 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 TPTE-202ENST00000612746 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 ACSM6-203ENST00000394005 1592 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.79□□□□□ -1
SNX18Q96RF0 AL445933.1-201ENST00000434240 2242 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 LIN37-201ENST00000301159 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 FCER1G-202ENST00000367992 551 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC007207.1-202ENST00000393388 498 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 SOX2OT_exon3.1-201ENST00000410534 276 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 RN7SKP270-201ENST00000411297 312 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 COPS5P1-201ENST00000415778 785 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 PPP1R12BP2-201ENST00000416956 639 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AP000552.2-201ENST00000422450 689 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC007253.1-201ENST00000425555 889 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 CRYZP1-201ENST00000428923 947 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AL353150.1-202ENST00000429700 585 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC098828.3-201ENST00000430429 746 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 AL390786.1-201ENST00000432108 309 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AL049733.1-201ENST00000440178 603 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 IFNWP15-201ENST00000442022 600 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 BANF1P5-201ENST00000445285 259 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC009502.2-201ENST00000452903 766 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC021915.2-201ENST00000520496 635 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC090099.3-201ENST00000524640 979 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 ARHGDIB-206ENST00000541546 859 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC007552.2-201ENST00000541892 603 ntTSL 4 BASIC8.79□□□□□ -1
SNX18Q96RF0 AL049870.1-201ENST00000557196 308 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 DMAC2-209ENST00000590641 1026 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 MAGOH3P-201ENST00000605130 447 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 MIR6081-201ENST00000613785 97 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 MIR6127-201ENST00000614019 109 ntBASIC8.79□□□□□ -1
SNX18Q96RF0 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 ELOC-202ENST00000518127 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.79□□□□□ -1
SNX18Q96RF0 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC012456.1-201ENST00000430048 1605 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 LIMD1-AS1-201ENST00000427644 1536 ntTSL 3 BASIC8.79□□□□□ -1
SNX18Q96RF0 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC8.79□□□□□ -1
SNX18Q96RF0 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SNX18Q96RF0 AC011453.1-201ENST00000597619 2239 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 CCT6P4-201ENST00000430443 1589 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC8.78□□□□□ -1
SNX18Q96RF0 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 CEP63-203ENST00000354446 1835 ntTSL 2 BASIC8.78□□□□□ -1
SNX18Q96RF0 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 AC022762.2-201ENST00000600308 1353 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 AL512353.1-201ENST00000414798 514 ntTSL 3 BASIC8.78□□□□□ -1
SNX18Q96RF0 AL158207.1-201ENST00000417984 341 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AC118555.1-201ENST00000426386 696 ntTSL 3 BASIC8.78□□□□□ -1
SNX18Q96RF0 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC8.78□□□□□ -1
SNX18Q96RF0 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 AC139887.1-201ENST00000454037 286 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms