Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 PTCH1-206ENST00000421141 7659 ntTSL 5 BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SYCE2Q6PIF2 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 RGS22-218ENST00000617334 4253 ntTSL 5 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 ZNF423-202ENST00000535559 4201 ntTSL 2 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 LINC02357-201ENST00000637313 1622 ntTSL 5 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AZI2-202ENST00000334100 943 ntTSL 3 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 PILRA-203ENST00000394000 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC092035.1-201ENST00000418538 390 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 RPL5P3-201ENST00000493817 889 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC023232.1-201ENST00000524963 285 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 TUBBP8-201ENST00000560273 1232 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 RN7SL804P-201ENST00000582466 298 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC119868.2-201ENST00000583991 432 ntTSL 3 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC008751.1-201ENST00000600438 342 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 U62317.5-201ENST00000609268 362 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC007450.2-201ENST00000614160 290 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC105133.2-201ENST00000624158 461 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC005691.1-201ENST00000624723 401 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 ZCCHC6-205ENST00000375960 4939 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 POLR3B-201ENST00000228347 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 ADGRF5P2-201ENST00000423199 1659 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 AC209007.1-201ENST00000401075 1342 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 CICP22-201ENST00000432801 1319 ntBASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 SP100-201ENST00000264052 3882 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SYCE2Q6PIF2 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 CYTIP-201ENST00000264192 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ACTG1P9-201ENST00000457622 2658 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AKNAD1-203ENST00000370001 3053 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AL392083.1-201ENST00000632982 2985 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 PNLIPRP1-214ENST00000528052 1533 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 LINC01654-201ENST00000569711 2471 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 FLJ22447-201ENST00000229465 1655 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 C12orf54-201ENST00000314014 887 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 RNU1-34P-201ENST00000364421 157 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 FAM213AP1-201ENST00000418757 668 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AL021707.4-201ENST00000423346 410 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AP001318.1-201ENST00000476981 321 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 CUTA-213ENST00000494751 731 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 GJA1P1-201ENST00000511478 1143 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AC104117.2-201ENST00000523735 515 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 PLBD1-AS1-201ENST00000542401 539 ntTSL 4 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 CYP4A26P-201ENST00000563017 196 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 SNX11-206ENST00000580219 1200 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 RN7SL557P-201ENST00000581047 286 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 YARS-210ENST00000616261 1167 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 AC024257.4-201ENST00000618746 458 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 MIR3150A-201ENST00000636546 80 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 RMND1-201ENST00000336451 1413 ntTSL 2 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 TIAM1-207ENST00000636887 4160 ntTSL 5 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 BCL11A-204ENST00000359629 2427 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 HS6ST3-202ENST00000620595 7073 ntBASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SYCE2Q6PIF2 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 PHC1-214ENST00000544916 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms