Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MGAM2-203ENST00000550469 1591 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 IL10RB-AS1-201ENST00000411998 2228 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC110079.1-201ENST00000567913 4395 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 UPRT-203ENST00000373383 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 MCPH1-203ENST00000519480 2917 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 WDR91-202ENST00000423565 4500 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 NSUN7-202ENST00000381782 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPL7AP72-201ENST00000417266 768 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPSAP33-201ENST00000432315 865 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC012501.2-201ENST00000437634 1281 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 SNX25P1-201ENST00000441817 834 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RN7SL420P-201ENST00000463843 298 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPSAP55-201ENST00000477347 876 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RPL29-206ENST00000481629 880 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RN7SL482P-201ENST00000487928 298 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 MTND6P25-201ENST00000528711 516 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 NDE1P2-201ENST00000605569 1105 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC079766.1-201ENST00000608774 427 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 SMCR2_1.1-201ENST00000621493 157 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 CLPS-203ENST00000622413 461 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 LINC01835-203ENST00000639800 567 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 LINC01132-202ENST00000641214 1085 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 C17orf102-201ENST00000623254 3997 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 GPRASP2-201ENST00000332262 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 SAMD4B-213ENST00000610417 3664 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 YWHAQP5-201ENST00000415616 1382 ntBASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 AC006004.1-201ENST00000434887 2145 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 COL10A1-202ENST00000327673 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SYCE2Q6PIF2 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 THY1-201ENST00000284240 3556 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 HSH2D-208ENST00000616645 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AL356961.1-201ENST00000567967 1923 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC102797.2-201ENST00000625076 1935 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 NLRP3-205ENST00000391827 2940 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 ARHGAP19-203ENST00000371027 2301 ntTSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 MIR4697HG-201ENST00000624667 5164 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 BEST1-201ENST00000378043 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 CATSPER2P1-204ENST00000439564 1579 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AL121929.2-201ENST00000609691 1432 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 OR4C15-201ENST00000314644 1113 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RN7SKP252-201ENST00000411210 327 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms