Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
S4R3C0 DUX4L6-201ENST00000626483 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 DUX4L1-201ENST00000627662 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 DUX4L8-201ENST00000629013 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 DUX4L3-201ENST00000630187 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 DUX4L7-201ENST00000630678 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 DUX4L5-201ENST00000630834 1275 ntBASIC16.27■□□□□ 0.2
S4R3C0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S4R3C0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S4R3C0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
S4R3C0 PLK5-205ENST00000642079 1969 ntBASIC16.27■□□□□ 0.19
S4R3C0 AP004607.4-201ENST00000530158 1459 ntBASIC16.27■□□□□ 0.19
S4R3C0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S4R3C0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.27■□□□□ 0.19
S4R3C0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S4R3C0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.26■□□□□ 0.19
S4R3C0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.26■□□□□ 0.19
S4R3C0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.26■□□□□ 0.19
S4R3C0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 SLC7A5P2-201ENST00000553010 536 ntBASIC16.26■□□□□ 0.19
S4R3C0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.26■□□□□ 0.19
S4R3C0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
S4R3C0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
S4R3C0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
S4R3C0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
S4R3C0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S4R3C0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.25■□□□□ 0.19
S4R3C0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.25■□□□□ 0.19
S4R3C0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.25■□□□□ 0.19
S4R3C0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.25■□□□□ 0.19
S4R3C0 AC138907.5-202ENST00000569484 235 ntBASIC16.25■□□□□ 0.19
S4R3C0 KRT18P61-201ENST00000585825 1298 ntBASIC16.25■□□□□ 0.19
S4R3C0 AP001160.3-201ENST00000601484 763 ntBASIC16.25■□□□□ 0.19
S4R3C0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.25■□□□□ 0.19
S4R3C0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.25■□□□□ 0.19
S4R3C0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
S4R3C0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.25■□□□□ 0.19
S4R3C0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.25■□□□□ 0.19
S4R3C0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
S4R3C0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.24■□□□□ 0.19
S4R3C0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.24■□□□□ 0.19
S4R3C0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 AC010141.2-201ENST00000452426 721 ntBASIC16.24■□□□□ 0.19
S4R3C0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.24■□□□□ 0.19
S4R3C0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
S4R3C0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
S4R3C0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
S4R3C0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
S4R3C0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
S4R3C0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
S4R3C0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
S4R3C0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.23■□□□□ 0.19
S4R3C0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
S4R3C0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.23■□□□□ 0.19
S4R3C0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms