Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC120498.8-201ENST00000614275 531 ntBASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 AC026471.5-201ENST00000615068 467 ntBASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 AC092865.7-201ENST00000641832 219 ntBASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 AC003102.1-202ENST00000563394 1796 ntBASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 AC007322.3-201ENST00000426526 701 ntBASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCH2Q9Y6C5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 MMP23A-201ENST00000234610 1017 ntBASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCH2Q9Y6C5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 AP003071.4-201ENST00000562276 1284 ntBASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
PTCH2Q9Y6C5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.5■■□□□ 1.35
PTCH2Q9Y6C5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCH2Q9Y6C5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 MIR6786-201ENST00000616843 113 ntBASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 AC006557.6-201ENST00000623071 864 ntBASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.48■■□□□ 1.35
PTCH2Q9Y6C5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.47■■□□□ 1.35
PTCH2Q9Y6C5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCH2Q9Y6C5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCH2Q9Y6C5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms