Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 GPX1P1-201ENST00000388829 606 ntBASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.91■□□□□ 0.94
RAI2Q9Y5P3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAI2Q9Y5P3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAI2Q9Y5P3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
RAI2Q9Y5P3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 MIR663A-201ENST00000385250 93 ntBASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 AL591742.1-201ENST00000604433 565 ntBASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI2Q9Y5P3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI2Q9Y5P3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 AC068338.2-201ENST00000563278 1430 ntBASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 AC116050.2-201ENST00000612102 1779 ntBASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.87■□□□□ 0.93
RAI2Q9Y5P3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 AC121338.2-201ENST00000622535 1744 ntBASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAI2Q9Y5P3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms