Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 AC007952.6-201ENST00000573168 2673 ntBASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 AC003957.1-201ENST00000625108 2673 ntBASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 CCDC92B-201ENST00000575506 885 ntBASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 AC027702.1-201ENST00000563810 1770 ntBASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA9Q9Y5H5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA9Q9Y5H5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 KRT18P14-201ENST00000534205 1250 ntBASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA9Q9Y5H5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA9Q9Y5H5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 AC121338.2-201ENST00000622535 1744 ntBASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA9Q9Y5H5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHA9Q9Y5H5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHA9Q9Y5H5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHA9Q9Y5H5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHA9Q9Y5H5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
PCDHA9Q9Y5H5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHA9Q9Y5H5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms