Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 LSM12P1-201ENST00000411836 588 ntBASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA9Q9Y5G4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 AC087742.1-201ENST00000575880 1738 ntBASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA9Q9Y5G4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 AL158047.1-201ENST00000445918 881 ntBASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA9Q9Y5G4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AC080038.3-201ENST00000623346 1952 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AP003097.1-201ENST00000530657 1135 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM21FP-204ENST00000608637 956 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AC100791.3-201ENST00000617619 330 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 AC061975.6-201ENST00000579045 1553 ntBASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA9Q9Y5G4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA9Q9Y5G4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms