Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB6Q9Y5F9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 AC010542.4-201ENST00000563151 1910 ntBASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 LINC01521-201ENST00000504184 1943 ntBASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB6Q9Y5F9 AL157384.1-201ENST00000445995 2473 ntBASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB6Q9Y5F9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB6Q9Y5F9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 AC142086.2-201ENST00000569753 217 ntBASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 AC005181.1-201ENST00000604782 1256 ntBASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 AC010536.3-201ENST00000620306 533 ntBASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB6Q9Y5F9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 AL050303.2-201ENST00000619798 666 ntBASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB6Q9Y5F9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGB6Q9Y5F9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB6Q9Y5F9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms