Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC42Q9Y546 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.49■□□□□ 0.71
LRRC42Q9Y546 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC42Q9Y546 AC093484.2-201ENST00000580996 2166 ntBASIC19.49■□□□□ 0.71
LRRC42Q9Y546 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC42Q9Y546 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.47■□□□□ 0.71
LRRC42Q9Y546 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 SPCS2P3-201ENST00000500401 656 ntBASIC19.47■□□□□ 0.71
LRRC42Q9Y546 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.47■□□□□ 0.71
LRRC42Q9Y546 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 FP700111.2-201ENST00000619190 1892 ntBASIC19.47■□□□□ 0.71
LRRC42Q9Y546 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 AL032819.2-201ENST00000624543 2162 ntBASIC19.47■□□□□ 0.71
LRRC42Q9Y546 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC42Q9Y546 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC42Q9Y546 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LRRC42Q9Y546 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRRC42Q9Y546 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC42Q9Y546 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms