Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LSM2Q9Y333 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM2Q9Y333 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM2Q9Y333 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM2Q9Y333 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM2Q9Y333 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM2Q9Y333 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LSM2Q9Y333 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM2Q9Y333 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 AL158211.5-201ENST00000623583 2518 ntBASIC18.36■□□□□ 0.53
LSM2Q9Y333 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM2Q9Y333 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 UNC93B8-201ENST00000511903 705 ntBASIC18.35■□□□□ 0.53
LSM2Q9Y333 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LSM2Q9Y333 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM2Q9Y333 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 SMUG1P1-201ENST00000590640 811 ntBASIC18.34■□□□□ 0.53
LSM2Q9Y333 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM2Q9Y333 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 AC092720.2-201ENST00000602388 1665 ntBASIC18.34■□□□□ 0.53
LSM2Q9Y333 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LSM2Q9Y333 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.33■□□□□ 0.53
LSM2Q9Y333 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.53
LSM2Q9Y333 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.33■□□□□ 0.53
LSM2Q9Y333 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LSM2Q9Y333 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.33■□□□□ 0.53
LSM2Q9Y333 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LSM2Q9Y333 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.33■□□□□ 0.52
LSM2Q9Y333 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
LSM2Q9Y333 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LSM2Q9Y333 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM2Q9Y333 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.33■□□□□ 0.52
LSM2Q9Y333 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 AP000974.1-201ENST00000623909 2387 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms