Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 MTDHP2-201ENST00000601468 714 ntBASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 AC092028.1-203ENST00000608262 953 ntBASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ERGIC3Q9Y282 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 Z92544.1-202ENST00000571933 1220 ntBASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 TNXA-203ENST00000507684 2038 ntBASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERGIC3Q9Y282 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 AC138932.1-201ENST00000534164 6830 ntBASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ERGIC3Q9Y282 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 AC004408.2-201ENST00000623613 2777 ntBASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERGIC3Q9Y282 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERGIC3Q9Y282 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERGIC3Q9Y282 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERGIC3Q9Y282 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ERGIC3Q9Y282 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms