Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.67■■□□□ 1.86
PDZRN3Q9UPQ7 MYC-209ENST00000641252 345 ntBASIC26.67■■□□□ 1.86
PDZRN3Q9UPQ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDZRN3Q9UPQ7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDZRN3Q9UPQ7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDZRN3Q9UPQ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 DUSP5P2-201ENST00000426873 1033 ntBASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 RPS2P52-201ENST00000469610 820 ntBASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 AC097658.1-201ENST00000475555 843 ntBASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 RARRES2P4-201ENST00000514074 484 ntBASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDZRN3Q9UPQ7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 GCSHP5-201ENST00000443090 522 ntBASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.65■■□□□ 1.86
PDZRN3Q9UPQ7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 AC098590.1-201ENST00000468126 897 ntBASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PDZRN3Q9UPQ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDZRN3Q9UPQ7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 AL162412.1-201ENST00000567129 965 ntBASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDZRN3Q9UPQ7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 ESRRAP1-201ENST00000400596 1257 ntBASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 AC093787.1-201ENST00000450396 207 ntBASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 AC083880.1-201ENST00000608266 535 ntBASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PDZRN3Q9UPQ7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 BX276092.2-201ENST00000417668 665 ntBASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 AC016405.3-201ENST00000607710 860 ntBASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 AC120498.10-201ENST00000621827 505 ntBASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDZRN3Q9UPQ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDZRN3Q9UPQ7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDZRN3Q9UPQ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PDZRN3Q9UPQ7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms