Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 AC053503.5-201ENST00000601508 636 ntBASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 AC243732.1-201ENST00000612648 864 ntBASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 AC139530.1-201ENST00000575312 1977 ntBASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 KRT17P1-201ENST00000399211 1546 ntBASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NOTCH3Q9UM47 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
NOTCH3Q9UM47 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 AC211429.1-201ENST00000415277 523 ntBASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 AC012618.2-201ENST00000428058 849 ntBASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 MIR718-201ENST00000390190 70 ntBASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 ECEL1P3-201ENST00000427961 737 ntBASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms