Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 RARRES2P4-201ENST00000514074 484 ntBASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 ITM2C-210ENST00000620962 501 ntBASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.37■■□□□ 1.33
HDAC6Q9UBN7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
HDAC6Q9UBN7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 AC097658.1-201ENST00000475555 843 ntBASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.35■■□□□ 1.33
HDAC6Q9UBN7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 AC005229.4-201ENST00000610085 2198 ntBASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 KRT18P29-201ENST00000397031 1267 ntBASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HDAC6Q9UBN7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 AC091874.3-201ENST00000512672 1195 ntBASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.33■■□□□ 1.33
HDAC6Q9UBN7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HDAC6Q9UBN7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
HDAC6Q9UBN7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.33■■□□□ 1.32
HDAC6Q9UBN7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 PRORSD1P-201ENST00000295112 541 ntBASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HDAC6Q9UBN7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 DUSP5P2-201ENST00000426873 1033 ntBASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HDAC6Q9UBN7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms