Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC88CQ9P219 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 TERF1P5-201ENST00000477545 1207 ntBASIC19.73■□□□□ 0.75
CCDC88CQ9P219 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 AC120498.10-201ENST00000621827 505 ntBASIC19.73■□□□□ 0.75
CCDC88CQ9P219 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC88CQ9P219 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 TSPY6P-201ENST00000448518 926 ntBASIC19.72■□□□□ 0.75
CCDC88CQ9P219 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC88CQ9P219 KRT18P6-201ENST00000555540 1265 ntBASIC19.71■□□□□ 0.75
CCDC88CQ9P219 AC105036.2-201ENST00000569468 176 ntBASIC19.71■□□□□ 0.75
CCDC88CQ9P219 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 AC073210.2-201ENST00000430369 194 ntBASIC19.71■□□□□ 0.75
CCDC88CQ9P219 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC88CQ9P219 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 SLC7A5P1-201ENST00000568957 537 ntBASIC19.7■□□□□ 0.74
CCDC88CQ9P219 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC88CQ9P219 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AC083880.1-201ENST00000608266 535 ntBASIC19.69■□□□□ 0.74
CCDC88CQ9P219 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms