Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 CROCCP5-201ENST00000436658 830 ntBASIC17.8■□□□□ 0.44
TREM2Q9NZC2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 AC008175.2-201ENST00000612840 297 ntBASIC17.8■□□□□ 0.44
TREM2Q9NZC2 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 MYCNOS-205ENST00000641950 531 ntBASIC17.8■□□□□ 0.44
TREM2Q9NZC2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TREM2Q9NZC2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TREM2Q9NZC2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 MIR663A-201ENST00000385250 93 ntBASIC17.78■□□□□ 0.44
TREM2Q9NZC2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TREM2Q9NZC2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 AC005229.4-201ENST00000610085 2198 ntBASIC17.77■□□□□ 0.44
TREM2Q9NZC2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.77■□□□□ 0.44
TREM2Q9NZC2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.77■□□□□ 0.44
TREM2Q9NZC2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TREM2Q9NZC2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.76■□□□□ 0.43
TREM2Q9NZC2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms