Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.77■□□□□ 0.75
NECTIN3Q9NQS3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NECTIN3Q9NQS3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.77■□□□□ 0.75
NECTIN3Q9NQS3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NECTIN3Q9NQS3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 AC061975.6-201ENST00000579045 1553 ntBASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 AC008175.2-201ENST00000612840 297 ntBASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN3Q9NQS3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 AC244015.2-201ENST00000616358 1861 ntBASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 KRT18P20-201ENST00000548986 1279 ntBASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN3Q9NQS3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.74■□□□□ 0.75
NECTIN3Q9NQS3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 KRT18P11-201ENST00000435214 1283 ntBASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 MYCNOS-205ENST00000641950 531 ntBASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NECTIN3Q9NQS3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NECTIN3Q9NQS3 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms