Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A1Q9HD20 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
ATP13A1Q9HD20 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ATP13A1Q9HD20 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A1Q9HD20 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 AL162412.1-201ENST00000567129 965 ntBASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 AC069236.1-201ENST00000604339 616 ntBASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 AC008694.1-202ENST00000636953 945 ntBASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP13A1Q9HD20 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 NCF1B-203ENST00000435988 1254 ntBASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 CDV3P1-201ENST00000471403 739 ntBASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 AC016405.3-201ENST00000607710 860 ntBASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP13A1Q9HD20 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 AL121832.2-201ENST00000610979 668 ntBASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP13A1Q9HD20 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 ID1-201ENST00000376105 1233 ntBASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 AC083906.2-201ENST00000511578 360 ntBASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 AC133552.2-202ENST00000575694 574 ntBASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A1Q9HD20 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 GPX1P1-201ENST00000388829 606 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 HLA-L-209ENST00000420110 1011 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 AF201337.1-201ENST00000520239 748 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 AC105036.2-201ENST00000569468 176 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms