Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 MCRIP2P1-201ENST00000394346 511 ntBASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 CYP2T3P-201ENST00000601990 817 ntBASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 AC092118.2-201ENST00000613495 667 ntBASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 CYP21A1P-202ENST00000354927 1481 ntBASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 BX276092.2-201ENST00000417668 665 ntBASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 MIR4758-201ENST00000577688 71 ntBASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CSNK1G1Q9HCP0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
CSNK1G1Q9HCP0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 AC069152.1-201ENST00000438030 544 ntBASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSNK1G1Q9HCP0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 AC098934.4-201ENST00000564127 592 ntBASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 AC133041.1-202ENST00000642053 222 ntBASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSNK1G1Q9HCP0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 AL355472.2-201ENST00000422958 438 ntBASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSNK1G1Q9HCP0 AF106564.1-201ENST00000607058 2553 ntBASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 KRT17P1-201ENST00000399211 1546 ntBASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms