Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 KRT19P1-201ENST00000405746 1186 ntBASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 LINC01006-201ENST00000333319 2292 ntBASIC20.97■□□□□ 0.95
LRRC40Q9H9A6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LRRC40Q9H9A6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC40Q9H9A6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC40Q9H9A6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 AC097381.1-201ENST00000429019 1296 ntBASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 AC073130.3-201ENST00000624389 2278 ntBASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 AC007225.1-201ENST00000566331 1836 ntBASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC40Q9H9A6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 KRT18P61-201ENST00000585825 1298 ntBASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC40Q9H9A6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms