Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 MIR1238-201ENST00000408483 83 ntBASIC20.02■□□□□ 0.8
SPTBN4Q9H254 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.02■□□□□ 0.8
SPTBN4Q9H254 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTBN4Q9H254 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPTBN4Q9H254 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 C2orf69P3-201ENST00000565542 1120 ntBASIC20.01■□□□□ 0.79
SPTBN4Q9H254 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 AC116407.4-201ENST00000623319 1061 ntBASIC20.01■□□□□ 0.79
SPTBN4Q9H254 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.01■□□□□ 0.79
SPTBN4Q9H254 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20■□□□□ 0.79
SPTBN4Q9H254 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20■□□□□ 0.79
SPTBN4Q9H254 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20■□□□□ 0.79
SPTBN4Q9H254 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SPTBN4Q9H254 AC139530.3-201ENST00000620344 690 ntBASIC20■□□□□ 0.79
SPTBN4Q9H254 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20■□□□□ 0.79
SPTBN4Q9H254 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTBN4Q9H254 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPTBN4Q9H254 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 ATP5G1P1-201ENST00000448724 379 ntBASIC19.98■□□□□ 0.79
SPTBN4Q9H254 FAM21FP-204ENST00000608637 956 ntBASIC19.98■□□□□ 0.79
SPTBN4Q9H254 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 LINC01960-201ENST00000563759 1884 ntBASIC19.98■□□□□ 0.79
SPTBN4Q9H254 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTBN4Q9H254 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 AC061975.6-201ENST00000579045 1553 ntBASIC19.97■□□□□ 0.79
SPTBN4Q9H254 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTBN4Q9H254 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms