Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDH23Q9H251 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH23Q9H251 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.2■■□□□ 1.14
CDH23Q9H251 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.2■■□□□ 1.14
CDH23Q9H251 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.2■■□□□ 1.14
CDH23Q9H251 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.2■■□□□ 1.14
CDH23Q9H251 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CDH23Q9H251 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CDH23Q9H251 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDH23Q9H251 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.19■■□□□ 1.14
CDH23Q9H251 AL034346.1-201ENST00000568244 1277 ntBASIC22.19■■□□□ 1.14
CDH23Q9H251 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.19■■□□□ 1.14
CDH23Q9H251 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDH23Q9H251 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CDH23Q9H251 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDH23Q9H251 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDH23Q9H251 NTF6B-201ENST00000591913 560 ntBASIC22.19■■□□□ 1.14
CDH23Q9H251 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDH23Q9H251 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDH23Q9H251 AC087742.1-201ENST00000575880 1738 ntBASIC22.18■■□□□ 1.14
CDH23Q9H251 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.18■■□□□ 1.14
CDH23Q9H251 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.18■■□□□ 1.14
CDH23Q9H251 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.18■■□□□ 1.14
CDH23Q9H251 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.18■■□□□ 1.14
CDH23Q9H251 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.18■■□□□ 1.14
CDH23Q9H251 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CDH23Q9H251 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDH23Q9H251 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDH23Q9H251 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.17■■□□□ 1.14
CDH23Q9H251 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.17■■□□□ 1.14
CDH23Q9H251 AC092053.2-201ENST00000640557 1818 ntBASIC22.17■■□□□ 1.14
CDH23Q9H251 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CDH23Q9H251 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.17■■□□□ 1.14
CDH23Q9H251 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.17■■□□□ 1.14
CDH23Q9H251 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CDH23Q9H251 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDH23Q9H251 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH23Q9H251 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH23Q9H251 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.17■■□□□ 1.14
CDH23Q9H251 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.17■■□□□ 1.14
CDH23Q9H251 FAM21FP-204ENST00000608637 956 ntBASIC22.17■■□□□ 1.14
CDH23Q9H251 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.17■■□□□ 1.14
CDH23Q9H251 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH23Q9H251 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDH23Q9H251 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.17■■□□□ 1.14
CDH23Q9H251 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDH23Q9H251 MCRIP2P1-201ENST00000394346 511 ntBASIC22.16■■□□□ 1.14
CDH23Q9H251 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDH23Q9H251 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CDH23Q9H251 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDH23Q9H251 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.16■■□□□ 1.14
CDH23Q9H251 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.16■■□□□ 1.14
CDH23Q9H251 AC105020.6-201ENST00000621523 1217 ntBASIC22.16■■□□□ 1.14
CDH23Q9H251 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CDH23Q9H251 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.15■■□□□ 1.14
CDH23Q9H251 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.15■■□□□ 1.14
CDH23Q9H251 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.15■■□□□ 1.14
CDH23Q9H251 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.15■■□□□ 1.14
CDH23Q9H251 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.15■■□□□ 1.14
CDH23Q9H251 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDH23Q9H251 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.15■■□□□ 1.14
CDH23Q9H251 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDH23Q9H251 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CDH23Q9H251 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CDH23Q9H251 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
CDH23Q9H251 C9orf163-202ENST00000624034 2573 ntBASIC22.15■■□□□ 1.14
CDH23Q9H251 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDH23Q9H251 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms