Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF38Q9H0F5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF38Q9H0F5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RNF38Q9H0F5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF38Q9H0F5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF38Q9H0F5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 FAM201B-201ENST00000458407 597 ntBASIC21.49■■□□□ 1.03
RNF38Q9H0F5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 AC244015.2-201ENST00000616358 1861 ntBASIC21.49■■□□□ 1.03
RNF38Q9H0F5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF38Q9H0F5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 KRT18P68-201ENST00000392293 1000 ntBASIC21.48■■□□□ 1.03
RNF38Q9H0F5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.48■■□□□ 1.03
RNF38Q9H0F5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF38Q9H0F5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 POU5F1P3-201ENST00000428824 1078 ntBASIC21.47■■□□□ 1.03
RNF38Q9H0F5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF38Q9H0F5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 CYP21A1P-202ENST00000354927 1481 ntBASIC21.46■■□□□ 1.03
RNF38Q9H0F5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.46■■□□□ 1.03
RNF38Q9H0F5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF38Q9H0F5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RNF38Q9H0F5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
RNF38Q9H0F5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms