Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHACTR1Q9C0D0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PHACTR1Q9C0D0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
PHACTR1Q9C0D0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PHACTR1Q9C0D0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHACTR1Q9C0D0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 AC061975.6-201ENST00000579045 1553 ntBASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 AC008764.7-201ENST00000593779 1081 ntBASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 AC099778.1-201ENST00000568593 1911 ntBASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.94■□□□□ 0.94
PHACTR1Q9C0D0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 AC012414.1-201ENST00000556676 535 ntBASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHACTR1Q9C0D0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.92■□□□□ 0.94
PHACTR1Q9C0D0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHACTR1Q9C0D0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 AC092720.2-201ENST00000602388 1665 ntBASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 EDA-201ENST00000338901 1233 ntBASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 AP001330.3-201ENST00000520123 633 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms