Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIM7Q9C029 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM7Q9C029 KRT18P61-201ENST00000585825 1298 ntBASIC21.9■■□□□ 1.1
TRIM7Q9C029 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM7Q9C029 AC006128.1-201ENST00000624704 1661 ntBASIC21.9■■□□□ 1.1
TRIM7Q9C029 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM7Q9C029 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM7Q9C029 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM7Q9C029 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM7Q9C029 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.89■■□□□ 1.1
TRIM7Q9C029 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM7Q9C029 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.89■■□□□ 1.1
TRIM7Q9C029 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM7Q9C029 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
TRIM7Q9C029 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM7Q9C029 LINC01006-201ENST00000333319 2292 ntBASIC21.89■■□□□ 1.09
TRIM7Q9C029 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM7Q9C029 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM7Q9C029 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 AC138907.5-202ENST00000569484 235 ntBASIC21.89■■□□□ 1.09
TRIM7Q9C029 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM7Q9C029 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM7Q9C029 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM7Q9C029 AP004607.4-201ENST00000530158 1459 ntBASIC21.89■■□□□ 1.09
TRIM7Q9C029 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM7Q9C029 AC121338.2-201ENST00000622535 1744 ntBASIC21.89■■□□□ 1.09
TRIM7Q9C029 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 AC104187.1-201ENST00000607510 612 ntBASIC21.88■■□□□ 1.09
TRIM7Q9C029 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRIM7Q9C029 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM7Q9C029 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 FEM1AP1-201ENST00000431297 1995 ntBASIC21.87■■□□□ 1.09
TRIM7Q9C029 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 KRT18P14-201ENST00000534205 1250 ntBASIC21.87■■□□□ 1.09
TRIM7Q9C029 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM7Q9C029 AC004854.2-201ENST00000608450 1441 ntBASIC21.87■■□□□ 1.09
TRIM7Q9C029 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM7Q9C029 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.86■■□□□ 1.09
TRIM7Q9C029 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM7Q9C029 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM7Q9C029 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM7Q9C029 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM7Q9C029 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TRIM7Q9C029 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM7Q9C029 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM7Q9C029 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM7Q9C029 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms