Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.32■■□□□ 1
FOXP3Q9BZS1 AC007225.1-201ENST00000566331 1836 ntBASIC21.32■■□□□ 1
FOXP3Q9BZS1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXP3Q9BZS1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.31■■□□□ 1
FOXP3Q9BZS1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.31■■□□□ 1
FOXP3Q9BZS1 AC009237.3-201ENST00000393279 1427 ntBASIC21.31■■□□□ 1
FOXP3Q9BZS1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.31■■□□□ 1
FOXP3Q9BZS1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.31■■□□□ 1
FOXP3Q9BZS1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.31■■□□□ 1
FOXP3Q9BZS1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.31■■□□□ 1
FOXP3Q9BZS1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 LINC02228-203ENST00000641970 1355 ntBASIC21.31■■□□□ 1
FOXP3Q9BZS1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXP3Q9BZS1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.31■■□□□ 1
FOXP3Q9BZS1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXP3Q9BZS1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXP3Q9BZS1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXP3Q9BZS1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXP3Q9BZS1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.3■■□□□ 1
FOXP3Q9BZS1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 AC020907.5-201ENST00000624372 1936 ntBASIC21.29■■□□□ 1
FOXP3Q9BZS1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 TERF1P2-201ENST00000583350 1212 ntBASIC21.29■■□□□ 1
FOXP3Q9BZS1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 AC105233.4-201ENST00000642045 216 ntBASIC21.29■■□□□ 1
FOXP3Q9BZS1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXP3Q9BZS1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXP3Q9BZS1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 AC027702.1-201ENST00000563810 1770 ntBASIC21.28■■□□□ 1
FOXP3Q9BZS1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FOXP3Q9BZS1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXP3Q9BZS1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.27■■□□□ 1
FOXP3Q9BZS1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXP3Q9BZS1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXP3Q9BZS1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXP3Q9BZS1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.27■□□□□ 0.99
FOXP3Q9BZS1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
FOXP3Q9BZS1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms