Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.35□□□□□ -0.11
UPK3BQ9BT76 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 AC133552.2-202ENST00000575694 574 ntBASIC14.35□□□□□ -0.11
UPK3BQ9BT76 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 AC061975.6-201ENST00000579045 1553 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 AC104771.1-201ENST00000603335 964 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 AL109923.1-201ENST00000618799 583 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 AL050303.2-201ENST00000619798 666 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 AL391422.3-201ENST00000603791 2761 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 AC010542.4-201ENST00000563151 1910 ntBASIC14.34□□□□□ -0.11
UPK3BQ9BT76 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK3BQ9BT76 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UPK3BQ9BT76 AC026471.6-201ENST00000622954 1905 ntBASIC14.33□□□□□ -0.11
UPK3BQ9BT76 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
UPK3BQ9BT76 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.33□□□□□ -0.12
UPK3BQ9BT76 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UPK3BQ9BT76 AC068338.2-201ENST00000563278 1430 ntBASIC14.32□□□□□ -0.12
UPK3BQ9BT76 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 AF106564.1-201ENST00000607058 2553 ntBASIC14.32□□□□□ -0.12
UPK3BQ9BT76 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 AC245052.3-201ENST00000450182 901 ntBASIC14.32□□□□□ -0.12
UPK3BQ9BT76 AC069236.1-201ENST00000604339 616 ntBASIC14.32□□□□□ -0.12
UPK3BQ9BT76 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 OR10C1-204ENST00000622521 1039 ntBASIC14.32□□□□□ -0.12
UPK3BQ9BT76 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK3BQ9BT76 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms