Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 AL139246.5-201ENST00000606645 996 ntBASIC12.26□□□□□ -0.45
LIMD2Q9BT23 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 AF213884.3-201ENST00000563833 479 ntBASIC12.25□□□□□ -0.45
LIMD2Q9BT23 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 SMUG1P1-201ENST00000590640 811 ntBASIC12.25□□□□□ -0.45
LIMD2Q9BT23 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIMD2Q9BT23 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 MIR572-201ENST00000384983 95 ntBASIC12.24□□□□□ -0.45
LIMD2Q9BT23 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 MIR939-201ENST00000401314 82 ntBASIC12.24□□□□□ -0.45
LIMD2Q9BT23 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIMD2Q9BT23 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 AC142381.2-201ENST00000566120 298 ntBASIC12.23□□□□□ -0.45
LIMD2Q9BT23 AL354811.1-201ENST00000610286 706 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms