Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC22CQ9BRL7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
SEC22CQ9BRL7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 AL499627.2-201ENST00000606283 725 ntBASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC22CQ9BRL7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 FP700111.2-201ENST00000619190 1892 ntBASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 TCF3P1-201ENST00000423021 1937 ntBASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC22CQ9BRL7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 U85056.1-201ENST00000616429 682 ntBASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEC22CQ9BRL7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 DUX4L18-201ENST00000553347 1267 ntBASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 MIR6722-201ENST00000617286 78 ntBASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC22CQ9BRL7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SEC22CQ9BRL7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEC22CQ9BRL7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms