Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1CQ9BQE3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBA1CQ9BQE3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBA1CQ9BQE3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 AC022517.1-201ENST00000592429 346 ntBASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBA1CQ9BQE3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBA1CQ9BQE3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms