Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FOXC2Q99958 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
FOXC2Q99958 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXC2Q99958 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXC2Q99958 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXC2Q99958 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
FOXC2Q99958 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXC2Q99958 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXC2Q99958 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXC2Q99958 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXC2Q99958 AL049597.2-201ENST00000565575 961 ntBASIC17.46■□□□□ 0.39
FOXC2Q99958 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.46■□□□□ 0.39
FOXC2Q99958 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
FOXC2Q99958 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXC2Q99958 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXC2Q99958 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXC2Q99958 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FOXC2Q99958 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FOXC2Q99958 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FOXC2Q99958 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXC2Q99958 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
FOXC2Q99958 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXC2Q99958 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXC2Q99958 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.45■□□□□ 0.38
FOXC2Q99958 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FOXC2Q99958 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXC2Q99958 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FOXC2Q99958 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXC2Q99958 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXC2Q99958 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXC2Q99958 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
FOXC2Q99958 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXC2Q99958 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
FOXC2Q99958 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXC2Q99958 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
FOXC2Q99958 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXC2Q99958 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXC2Q99958 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXC2Q99958 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.44■□□□□ 0.38
FOXC2Q99958 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXC2Q99958 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 AC012676.1-201ENST00000574705 1949 ntBASIC17.43■□□□□ 0.38
FOXC2Q99958 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXC2Q99958 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXC2Q99958 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXC2Q99958 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXC2Q99958 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXC2Q99958 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXC2Q99958 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXC2Q99958 AC092865.7-201ENST00000641832 219 ntBASIC17.43■□□□□ 0.38
FOXC2Q99958 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
FOXC2Q99958 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms