Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATF6BQ99941 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATF6BQ99941 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ATF6BQ99941 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 AL354811.1-201ENST00000610286 706 ntBASIC18.49■□□□□ 0.55
ATF6BQ99941 AC005837.3-201ENST00000612163 286 ntBASIC18.49■□□□□ 0.55
ATF6BQ99941 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATF6BQ99941 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.49■□□□□ 0.55
ATF6BQ99941 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.49■□□□□ 0.55
ATF6BQ99941 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF6BQ99941 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATF6BQ99941 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.48■□□□□ 0.55
ATF6BQ99941 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF6BQ99941 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
ATF6BQ99941 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.47■□□□□ 0.55
ATF6BQ99941 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.47■□□□□ 0.55
ATF6BQ99941 AL358852.1-201ENST00000623174 1268 ntBASIC18.47■□□□□ 0.55
ATF6BQ99941 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.47■□□□□ 0.55
ATF6BQ99941 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.47■□□□□ 0.55
ATF6BQ99941 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATF6BQ99941 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATF6BQ99941 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF6BQ99941 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATF6BQ99941 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.46■□□□□ 0.55
ATF6BQ99941 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.46■□□□□ 0.55
ATF6BQ99941 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.46■□□□□ 0.55
ATF6BQ99941 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.46■□□□□ 0.55
ATF6BQ99941 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATF6BQ99941 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATF6BQ99941 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATF6BQ99941 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ATF6BQ99941 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.45■□□□□ 0.54
ATF6BQ99941 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.45■□□□□ 0.54
ATF6BQ99941 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.45■□□□□ 0.54
ATF6BQ99941 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATF6BQ99941 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms