Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NDNQ99608 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.66■□□□□ 0.9
NDNQ99608 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.66■□□□□ 0.9
NDNQ99608 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.66■□□□□ 0.9
NDNQ99608 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.66■□□□□ 0.9
NDNQ99608 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.66■□□□□ 0.9
NDNQ99608 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
NDNQ99608 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDNQ99608 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.66■□□□□ 0.9
NDNQ99608 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NDNQ99608 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
NDNQ99608 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.65■□□□□ 0.9
NDNQ99608 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NDNQ99608 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NDNQ99608 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NDNQ99608 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.65■□□□□ 0.9
NDNQ99608 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 FEM1AP1-201ENST00000431297 1995 ntBASIC20.65■□□□□ 0.9
NDNQ99608 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDNQ99608 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NDNQ99608 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NDNQ99608 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.64■□□□□ 0.89
NDNQ99608 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.64■□□□□ 0.89
NDNQ99608 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.64■□□□□ 0.89
NDNQ99608 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.64■□□□□ 0.89
NDNQ99608 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDNQ99608 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NDNQ99608 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NDNQ99608 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.63■□□□□ 0.89
NDNQ99608 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.63■□□□□ 0.89
NDNQ99608 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.63■□□□□ 0.89
NDNQ99608 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.63■□□□□ 0.89
NDNQ99608 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDNQ99608 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.62■□□□□ 0.89
NDNQ99608 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NDNQ99608 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.62■□□□□ 0.89
NDNQ99608 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NDNQ99608 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.62■□□□□ 0.89
NDNQ99608 YBX1P1-201ENST00000445822 960 ntBASIC20.62■□□□□ 0.89
NDNQ99608 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
NDNQ99608 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.62■□□□□ 0.89
NDNQ99608 AC138907.5-202ENST00000569484 235 ntBASIC20.62■□□□□ 0.89
NDNQ99608 AC104187.1-201ENST00000607510 612 ntBASIC20.62■□□□□ 0.89
NDNQ99608 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 AC008175.2-201ENST00000612840 297 ntBASIC20.62■□□□□ 0.89
NDNQ99608 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NDNQ99608 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDNQ99608 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NDNQ99608 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.61■□□□□ 0.89
NDNQ99608 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.61■□□□□ 0.89
NDNQ99608 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDNQ99608 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms