Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSMD1Q96PZ7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 AL589743.5-201ENST00000616611 1050 ntBASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD1Q96PZ7 AC087633.2-202ENST00000565166 1439 ntBASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 AC113410.3-201ENST00000623366 203 ntBASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 AC006557.6-201ENST00000623071 864 ntBASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD1Q96PZ7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 KRT8P9-201ENST00000558927 1449 ntBASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 CRYGFP-201ENST00000418459 633 ntBASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.71■□□□□ 0.43
CSMD1Q96PZ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
CSMD1Q96PZ7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 AC133561.1-201ENST00000568600 2415 ntBASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 AC100791.3-201ENST00000617619 330 ntBASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSMD1Q96PZ7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 CYP2D8P-201ENST00000433633 1490 ntBASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms