Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP40Q96DI7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 AC010542.4-201ENST00000563151 1910 ntBASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP40Q96DI7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 AC012618.2-201ENST00000428058 849 ntBASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 BX088651.1-201ENST00000540551 451 ntBASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 AC233702.5-201ENST00000584107 538 ntBASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP40Q96DI7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SNRNP40Q96DI7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNRNP40Q96DI7 AC068473.5-201ENST00000616428 2072 ntBASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 RPS2P55-201ENST00000397318 883 ntBASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 AC107956.1-201ENST00000494359 873 ntBASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 AC010331.1-201ENST00000611423 582 ntBASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP40Q96DI7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 TSPY7P-201ENST00000431358 1114 ntBASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 KRT17P2-201ENST00000300992 1314 ntBASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP40Q96DI7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP40Q96DI7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms