Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PBX2P1-201ENST00000493219 1291 ntBASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP3Q96CW5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 FP700111.2-201ENST00000619190 1892 ntBASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 AC096631.2-201ENST00000436136 790 ntBASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 AC020907.5-201ENST00000624372 1936 ntBASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TUBGCP3Q96CW5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TUBGCP3Q96CW5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
TUBGCP3Q96CW5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP3Q96CW5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP3Q96CW5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.02■□□□□ 0.79
TUBGCP3Q96CW5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.79
TUBGCP3Q96CW5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 MIR572-201ENST00000384983 95 ntBASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBGCP3Q96CW5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 AC008406.3-201ENST00000620001 1374 ntBASIC20■□□□□ 0.79
TUBGCP3Q96CW5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBGCP3Q96CW5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms