Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 CYP2T1P-201ENST00000432607 1285 ntBASIC18.56■□□□□ 0.56
CPNE4Q96A23 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 AC069236.1-201ENST00000604339 616 ntBASIC18.56■□□□□ 0.56
CPNE4Q96A23 AC008694.1-202ENST00000636953 945 ntBASIC18.56■□□□□ 0.56
CPNE4Q96A23 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE4Q96A23 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CPNE4Q96A23 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.55■□□□□ 0.56
CPNE4Q96A23 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.55■□□□□ 0.56
CPNE4Q96A23 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE4Q96A23 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 RNF165-205ENST00000588679 2904 ntBASIC18.54■□□□□ 0.56
CPNE4Q96A23 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE4Q96A23 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CPNE4Q96A23 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 AC116050.2-201ENST00000612102 1779 ntBASIC18.53■□□□□ 0.56
CPNE4Q96A23 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 AC007322.3-201ENST00000426526 701 ntBASIC18.53■□□□□ 0.56
CPNE4Q96A23 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 FAM21FP-204ENST00000608637 956 ntBASIC18.53■□□□□ 0.56
CPNE4Q96A23 OR10C1-204ENST00000622521 1039 ntBASIC18.53■□□□□ 0.56
CPNE4Q96A23 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE4Q96A23 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CPNE4Q96A23 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE4Q96A23 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE4Q96A23 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE4Q96A23 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.52■□□□□ 0.56
CPNE4Q96A23 AC133552.2-202ENST00000575694 574 ntBASIC18.52■□□□□ 0.56
CPNE4Q96A23 AL121832.2-201ENST00000610979 668 ntBASIC18.52■□□□□ 0.56
CPNE4Q96A23 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE4Q96A23 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE4Q96A23 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE4Q96A23 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE4Q96A23 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE4Q96A23 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms