Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NCLNQ969V3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.97■□□□□ 0.79
NCLNQ969V3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCLNQ969V3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCLNQ969V3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCLNQ969V3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCLNQ969V3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
NCLNQ969V3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
NCLNQ969V3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.96■□□□□ 0.79
NCLNQ969V3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.96■□□□□ 0.79
NCLNQ969V3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.96■□□□□ 0.79
NCLNQ969V3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.96■□□□□ 0.79
NCLNQ969V3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.96■□□□□ 0.79
NCLNQ969V3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.96■□□□□ 0.79
NCLNQ969V3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.96■□□□□ 0.79
NCLNQ969V3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.96■□□□□ 0.79
NCLNQ969V3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCLNQ969V3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
NCLNQ969V3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NCLNQ969V3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NCLNQ969V3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.95■□□□□ 0.78
NCLNQ969V3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 AC079140.4-201ENST00000507448 529 ntBASIC19.95■□□□□ 0.78
NCLNQ969V3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.95■□□□□ 0.78
NCLNQ969V3 NTF6G-201ENST00000591094 616 ntBASIC19.95■□□□□ 0.78
NCLNQ969V3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NCLNQ969V3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.95■□□□□ 0.78
NCLNQ969V3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NCLNQ969V3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.95■□□□□ 0.78
NCLNQ969V3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.95■□□□□ 0.78
NCLNQ969V3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
NCLNQ969V3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCLNQ969V3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NCLNQ969V3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.94■□□□□ 0.78
NCLNQ969V3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 LINC01006-201ENST00000333319 2292 ntBASIC19.94■□□□□ 0.78
NCLNQ969V3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.94■□□□□ 0.78
NCLNQ969V3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.94■□□□□ 0.78
NCLNQ969V3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NCLNQ969V3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.94■□□□□ 0.78
NCLNQ969V3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NCLNQ969V3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NCLNQ969V3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCLNQ969V3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.93■□□□□ 0.78
NCLNQ969V3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLNQ969V3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLNQ969V3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.93■□□□□ 0.78
NCLNQ969V3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCLNQ969V3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.93■□□□□ 0.78
NCLNQ969V3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLNQ969V3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NCLNQ969V3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.93■□□□□ 0.78
NCLNQ969V3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLNQ969V3 AC055733.4-201ENST00000638462 1354 ntBASIC19.93■□□□□ 0.78
NCLNQ969V3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NCLNQ969V3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLNQ969V3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NCLNQ969V3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NCLNQ969V3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLNQ969V3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NCLNQ969V3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLNQ969V3 AL049796.1-201ENST00000565336 1766 ntBASIC19.92■□□□□ 0.78
NCLNQ969V3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLNQ969V3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLNQ969V3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms