Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC005229.4-201ENST00000610085 2198 ntBASIC24.43■■□□□ 1.5
STAG1Q8WVM7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 GUSBP6-202ENST00000438529 1198 ntBASIC24.43■■□□□ 1.5
STAG1Q8WVM7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
STAG1Q8WVM7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
STAG1Q8WVM7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
STAG1Q8WVM7 AL512625.2-201ENST00000417533 625 ntBASIC24.41■■□□□ 1.5
STAG1Q8WVM7 AF201337.1-201ENST00000520239 748 ntBASIC24.41■■□□□ 1.5
STAG1Q8WVM7 AC142086.2-201ENST00000569753 217 ntBASIC24.41■■□□□ 1.5
STAG1Q8WVM7 AC008694.1-202ENST00000636953 945 ntBASIC24.41■■□□□ 1.5
STAG1Q8WVM7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 AC093787.1-201ENST00000450396 207 ntBASIC24.4■■□□□ 1.5
STAG1Q8WVM7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
STAG1Q8WVM7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
STAG1Q8WVM7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
STAG1Q8WVM7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
STAG1Q8WVM7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 AC105036.2-201ENST00000569468 176 ntBASIC24.39■■□□□ 1.49
STAG1Q8WVM7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
STAG1Q8WVM7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 AC121338.2-201ENST00000622535 1744 ntBASIC24.38■■□□□ 1.49
STAG1Q8WVM7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
STAG1Q8WVM7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.37■■□□□ 1.49
STAG1Q8WVM7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 SLC29A4P1-201ENST00000398760 971 ntBASIC24.36■■□□□ 1.49
STAG1Q8WVM7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 AC100791.3-201ENST00000617619 330 ntBASIC24.36■■□□□ 1.49
STAG1Q8WVM7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms