Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.95■□□□□ 0.46
LINC01560Q8TB33 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 AC008550.1-201ENST00000511500 884 ntBASIC17.95■□□□□ 0.46
LINC01560Q8TB33 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01560Q8TB33 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 RPPH1-201ENST00000516869 333 ntBASIC17.94■□□□□ 0.46
LINC01560Q8TB33 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 SOX15-203ENST00000570788 1093 ntBASIC17.94■□□□□ 0.46
LINC01560Q8TB33 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 AC116050.2-201ENST00000612102 1779 ntBASIC17.94■□□□□ 0.46
LINC01560Q8TB33 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01560Q8TB33 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01560Q8TB33 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.92■□□□□ 0.46
LINC01560Q8TB33 AC233263.1-201ENST00000578059 224 ntBASIC17.92■□□□□ 0.46
LINC01560Q8TB33 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms