Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LINC01555Q8NAE3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
LINC01555Q8NAE3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 AC011484.1-201ENST00000377652 1995 ntBASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 CLDN5-201ENST00000403084 2357 ntBASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 AC083906.2-201ENST00000511578 360 ntBASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 AC069236.1-201ENST00000604339 616 ntBASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 OR10C1-204ENST00000622521 1039 ntBASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC01555Q8NAE3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 GUSBP6-202ENST00000438529 1198 ntBASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 AL121832.2-201ENST00000610979 668 ntBASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
LINC01555Q8NAE3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 AF201337.1-201ENST00000520239 748 ntBASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 AC105036.2-201ENST00000569468 176 ntBASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 AC008694.1-202ENST00000636953 945 ntBASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 PLK5-205ENST00000642079 1969 ntBASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01555Q8NAE3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 GPX1P1-201ENST00000388829 606 ntBASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 AC121338.2-201ENST00000622535 1744 ntBASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.92■□□□□ 0.78
LINC01555Q8NAE3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 ID1-201ENST00000376105 1233 ntBASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 AL512625.2-201ENST00000417533 625 ntBASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 HLA-L-209ENST00000420110 1011 ntBASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 AC104771.1-201ENST00000603335 964 ntBASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01555Q8NAE3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms