Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AL157384.1-201ENST00000445995 2473 ntBASIC18.92■□□□□ 0.62
LSMEM1Q8N8F7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.92■□□□□ 0.62
LSMEM1Q8N8F7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 KRT18P20-201ENST00000548986 1279 ntBASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 RARRES2P11-201ENST00000635158 484 ntBASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSMEM1Q8N8F7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 KRT18P14-201ENST00000534205 1250 ntBASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSMEM1Q8N8F7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.89■□□□□ 0.62
LSMEM1Q8N8F7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSMEM1Q8N8F7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 AP001160.3-201ENST00000601484 763 ntBASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LSMEM1Q8N8F7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 AC245052.3-201ENST00000450182 901 ntBASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 AC007225.1-201ENST00000566331 1836 ntBASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSMEM1Q8N8F7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.87■□□□□ 0.61
LSMEM1Q8N8F7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 AP005212.1-201ENST00000581547 1997 ntBASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms