Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 AC011484.1-201ENST00000377652 1995 ntBASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC9CQ8N5M4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 KRT18P61-201ENST00000585825 1298 ntBASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC9CQ8N5M4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 AC243732.1-201ENST00000612648 864 ntBASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC9CQ8N5M4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 AC026271.2-201ENST00000428091 497 ntBASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 RARRES2P6-201ENST00000567333 442 ntBASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TTC9CQ8N5M4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.27■□□□□ 0.2
TTC9CQ8N5M4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms