Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
VPS52Q8N1B4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.39■■□□□ 1.18
VPS52Q8N1B4 C11orf96-202ENST00000528572 1834 ntBASIC22.39■■□□□ 1.17
VPS52Q8N1B4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.39■■□□□ 1.17
VPS52Q8N1B4 RPS2P52-201ENST00000469610 820 ntBASIC22.39■■□□□ 1.17
VPS52Q8N1B4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS52Q8N1B4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS52Q8N1B4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.37■■□□□ 1.17
VPS52Q8N1B4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 AC098590.1-201ENST00000468126 897 ntBASIC22.37■■□□□ 1.17
VPS52Q8N1B4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS52Q8N1B4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 AL024507.2-201ENST00000606070 2574 ntBASIC22.36■■□□□ 1.17
VPS52Q8N1B4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS52Q8N1B4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.35■■□□□ 1.17
VPS52Q8N1B4 LSM12P1-201ENST00000411836 588 ntBASIC22.35■■□□□ 1.17
VPS52Q8N1B4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms