Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SIX5Q8N196 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SIX5Q8N196 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SIX5Q8N196 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX5Q8N196 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 RCN1P1-201ENST00000400413 996 ntBASIC21.21■□□□□ 0.99
SIX5Q8N196 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.21■□□□□ 0.99
SIX5Q8N196 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.21■□□□□ 0.99
SIX5Q8N196 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 AC124016.1-201ENST00000609552 612 ntBASIC21.21■□□□□ 0.99
SIX5Q8N196 AL023875.1-201ENST00000640777 796 ntBASIC21.21■□□□□ 0.99
SIX5Q8N196 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIX5Q8N196 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.21■□□□□ 0.99
SIX5Q8N196 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.2■□□□□ 0.99
SIX5Q8N196 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SIX5Q8N196 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
SIX5Q8N196 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.2■□□□□ 0.98
SIX5Q8N196 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SIX5Q8N196 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.2■□□□□ 0.98
SIX5Q8N196 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.2■□□□□ 0.98
SIX5Q8N196 MTDHP1-201ENST00000605323 784 ntBASIC21.2■□□□□ 0.98
SIX5Q8N196 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.2■□□□□ 0.98
SIX5Q8N196 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX5Q8N196 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.19■□□□□ 0.98
SIX5Q8N196 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.19■□□□□ 0.98
SIX5Q8N196 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.19■□□□□ 0.98
SIX5Q8N196 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.19■□□□□ 0.98
SIX5Q8N196 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.19■□□□□ 0.98
SIX5Q8N196 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.19■□□□□ 0.98
SIX5Q8N196 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX5Q8N196 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.19■□□□□ 0.98
SIX5Q8N196 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.18■□□□□ 0.98
SIX5Q8N196 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SIX5Q8N196 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 AC139530.1-201ENST00000575312 1977 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SIX5Q8N196 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SIX5Q8N196 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.18■□□□□ 0.98
SIX5Q8N196 AC239809.2-201ENST00000415381 517 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.18■□□□□ 0.98
SIX5Q8N196 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.18■□□□□ 0.98
SIX5Q8N196 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.18■□□□□ 0.98
SIX5Q8N196 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX5Q8N196 AL445228.2-201ENST00000605589 952 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 AC097493.4-201ENST00000641197 219 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.18■□□□□ 0.98
SIX5Q8N196 AL135905.2-201ENST00000584934 1404 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 AC087742.1-201ENST00000575880 1738 ntBASIC21.18■□□□□ 0.98
SIX5Q8N196 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.17■□□□□ 0.98
SIX5Q8N196 AC007322.3-201ENST00000426526 701 ntBASIC21.17■□□□□ 0.98
SIX5Q8N196 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.17■□□□□ 0.98
SIX5Q8N196 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SIX5Q8N196 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.17■□□□□ 0.98
SIX5Q8N196 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms